Times series averaging from a probabilistic interpretation of time-elastic kernel

At the light of regularized dynamic time warping kernels, this paper reconsider the concept of time elastic centroid (TEC) for a set of time series. From this perspective, we show first how TEC can easily be addressed as a preimage problem. Unfortunately this preimage problem is ill-posed, may suffer from over-fitting especially for long time series and getting a sub-optimal solution involves heavy computational costs. We then derive two new algorithms based on a probabilistic interpretation of kernel alignment matrices that expresses in terms of probabilistic distributions over sets of alignment paths. The first algorithm is an iterative agglomerative heuristics inspired from the state of the art DTW barycenter averaging (DBA) algorithm proposed specifically for the Dynamic Time Warping measure. The second proposed algorithm achieves a classical averaging of the aligned samples but also implements an averaging of the time of occurrences of the aligned samples. It exploits a straightforward progressive agglomerative heuristics. An experimentation that compares for 45 time series datasets classification error rates obtained by first near neighbors classifiers exploiting a single medoid or centroid estimate to represent each categories show that: i) centroids based approaches significantly outperform medoids based approaches, ii) on the considered experience, the two proposed algorithms outperform the state of the art DBA algorithm, and iii) the second proposed algorithm that implements an averaging jointly in the sample space and along the time axes emerges as the most significantly robust time elastic averaging heuristic with an interesting noise reduction capability. Index Terms-Time series averaging Time elastic kernel Dynamic Time Warping Time series clustering and classification

On Recursive Edit Distance Kernels with Application to Time Series Classification

This paper proposes some extensions to the work on kernels dedicated to string or time series global alignment based on the aggregation of scores obtained by local alignments. The extensions we propose allow to construct, from classical recursive definition of elastic distances, recursive edit distance (or time-warp) kernels that are positive definite if some sufficient conditions are satisfied. The sufficient conditions we end-up with are original and weaker than those proposed in earlier works, although a recursive regularizing term is required to get the proof of the positive definiteness as a direct consequence of the Haussler's convolution theorem. The classification experiment we conducted on three classical time warp distances (two of which being metrics), using Support Vector Machine classifier, leads to conclude that, when the pairwise distance matrix obtained from the training data is \textit{far} from definiteness, the positive definite recursive elastic kernels outperform in general the distance substituting kernels for the classical elastic distances we have tested.Comment: 14 page

Time Warp Edit Distance

This technical report details a family of time warp distances on the set of discrete time series. This family is constructed as an editing distance whose elementary operations apply on linear segments. A specific parameter allows controlling the stiffness of the elastic matching. It is well suited for the processing of event data for which each data sample is associated with a timestamp, not necessarily obtained according to a constant sampling rate. Some properties verified by these distances are proposed and proved in this report.Comment: Pattern Recognition - Clustering - Algorithms - Similarity Measure

Time Warp Edit Distance with Stiffness Adjustment for Time Series Matching

In a way similar to the string-to-string correction problem we address time series similarity in the light of a time-series-to-time-series-correction problem for which the similarity between two time series is measured as the minimum cost sequence of "edit operations" needed to transform one time series into another. To define the "edit operations" we use the paradigm of a graphical editing process and end up with a dynamic programming algorithm that we call Time Warp Edit Distance (TWED). TWED is slightly different in form from Dynamic Time Warping, Longest Common Subsequence or Edit Distance with Real Penalty algorithms. In particular, it highlights a parameter which drives a kind of stiffness of the elastic measure along the time axis. We show that the similarity provided by TWED is a metric potentially useful in time series retrieval applications since it could benefit from the triangular inequality property to speed up the retrieval process while tuning the parameters of the elastic measure. In that context, a lower bound is derived to relate the matching of time series into down sampled representation spaces to the matching into the original space. Empiric quality of the TWED distance is evaluated on a simple classification task. Compared to Edit Distance, Dynamic Time Warping, Longest Common Subsequnce and Edit Distance with Real Penalty, TWED has proven to be quite effective on the considered experimental task

Down-Sampling coupled to Elastic Kernel Machines for Efficient Recognition of Isolated Gestures

In the field of gestural action recognition, many studies have focused on dimensionality reduction along the spatial axis, to reduce both the variability of gestural sequences expressed in the reduced space, and the computational complexity of their processing. It is noticeable that very few of these methods have explicitly addressed the dimensionality reduction along the time axis. This is however a major issue with regard to the use of elastic distances characterized by a quadratic complexity. To partially fill this apparent gap, we present in this paper an approach based on temporal down-sampling associated to elastic kernel machine learning. We experimentally show, on two data sets that are widely referenced in the domain of human gesture recognition, and very different in terms of quality of motion capture, that it is possible to significantly reduce the number of skeleton frames while maintaining a good recognition rate. The method proves to give satisfactory results at a level currently reached by state-of-the-art methods on these data sets. The computational complexity reduction makes this approach eligible for real-time applications.Comment: ICPR 2014, International Conference on Pattern Recognition, Stockholm : Sweden (2014